STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP6V1FLOW QUALITY PROTEIN: V-type proton ATPase subunit F. (118 aa)    
Predicted Functional Partners:
ATP6V1E1
V-type H+-transporting ATPase subunit E.
  
 0.994
ATP6V1A
LOW QUALITY PROTEIN: V-type proton ATPase catalytic subunit A.
  
 0.989
ATP6V0B
V-type H+-transporting ATPase 21kDa proteolipid subunit.
  
 0.984
ATP6V1D
V-type H+-transporting ATPase subunit D.
  
 0.983
LIM2
Lens fiber membrane intrinsic protein.
  
 0.979
ATP6V1H
V-type proton ATPase subunit H isoform X1.
   
 0.978
ATP6V1B1
V-type proton ATPase subunit B, kidney isoform.
  
 0.976
ATP6V1B2
V-type proton ATPase subunit B, brain isoform.
  
 0.976
ATP6V0A1
V-type proton ATPase 116 kDa subunit a isoform X1.
  
 0.966
ATP6V0D2
V-type proton ATPase subunit d 2 isoform X1.
  
 0.962
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.