Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATPAF1ATP synthase mitochondrial F1 complex assembly factor 1. (353 aa)    
Predicted Functional Partners:
ATP5F1B
LOW QUALITY PROTEIN: ATP synthase subunit beta, mitochondrial.
    
 
 0.929
ATPAF2
ATP synthase mitochondrial F1 complex assembly factor 2 isoform X1.
   
 
 0.895
REV3L
LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit.
      
 0.801
OGG1
N-glycosylase/DNA lyase.
      
 0.715
CDCA8
Borealin.
    
 
 0.710
LYPD3
LOW QUALITY PROTEIN: ly6/PLAUR domain-containing protein 3.
      
 0.632
ATP5F1C
ATP synthase subunit gamma, mitochondrial isoform X1.
   
  
 0.620
PUM1
Pumilio homolog 1 isoform X1.
    
 
 0.600
PUM2
Pumilio RNA binding family member 2.
    
 
 0.600
ERAL1
Era like 12S mitochondrial rRNA chaperone 1.
    
   0.589
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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