Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AXDND1Axonemal dynein light chain domain-containing protein 1 isoform X1. (1054 aa)    
Predicted Functional Partners:
LRRIQ3
Leucine-rich repeat and IQ domain-containing protein 3 isoform X1.
      
 0.526
NUP133
Nuclear pore complex protein Nup133.
      
 0.516
ARL14
ADP ribosylation factor like GTPase 14.
      
 0.489
BCAS3
LOW QUALITY PROTEIN: breast carcinoma-amplified sequence 3.
      
 0.475
ENSPCIP00000044726
annotation not available
      
 0.475
INS
Insulin.
      
 0.457
CLCA2
LOW QUALITY PROTEIN: calcium-activated chloride channel regulator 2.
      
 0.444
B3GLCT
UDP-glucose:O-linked fucose beta-1,3-glucosyltransferase.
      
 0.424
CATSPER3
Cation channel sperm-associated protein 3 isoform X1.
      
 0.423
YBX3
Cold shock domain protein A.
      
 0.423
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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