STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MITD1MIT domain-containing protein 1 isoform X1. (250 aa)    
Predicted Functional Partners:
ENSPCIP00000009385
Charged multivesicular body protein 1b-2.
    
 
 0.794
CHMP1A
Charged multivesicular body protein 1a.
    
 
 0.794
TMEM121
Transmembrane protein 121 isoform X1.
      
 0.658
PGLYRP1
Peptidoglycan recognition protein 1.
      
 0.654
AKAP17A
Splicing factor, arginine/serine-rich 17.
      
 0.637
CHMP2A
Charged multivesicular body protein 2A.
    
 
 0.617
TXNDC9
Thioredoxin domain containing 9.
   
  
 0.566
TBCEL
Tubulin-specific chaperone cofactor E-like protein isoform X1.
      
 0.562
IDS
Iduronate 2-sulfatase.
      
 0.561
MRPL30
39S ribosomal protein L30, mitochondrial.
      
 0.560
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.