STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNDC9Thioredoxin domain containing 9. (225 aa)    
Predicted Functional Partners:
CCT3
T-complex protein 1 subunit gamma.
   
 0.919
FBXW4
F-box/WD repeat-containing protein 4 isoform X1.
    
   0.911
CCT5
T-complex protein 1 subunit epsilon.
   
 0.866
CCT7
LOW QUALITY PROTEIN: T-complex protein 1 subunit eta.
   
 0.863
CCT2
T-complex protein 1 subunit beta.
   
 0.853
WDR86
WD repeat-containing protein 86 isoform X1.
    
   0.831
KLHDC8A
Kelch domain-containing protein 8A isoform X1.
    
   0.824
PEX7
Peroxisomal biogenesis factor 7.
    
   0.819
MRPL30
39S ribosomal protein L30, mitochondrial.
   
  
 0.814
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11.
    
   0.771
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.