Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC4Leucine-rich repeat-containing protein 4. (650 aa)    
Predicted Functional Partners:
NTNG2
Netrin-G2 isoform X1.
   
 0.989
PTPRU
Receptor-type tyrosine-protein phosphatase U isoform X1.
   
 0.655
ANKRD34C
Ankyrin repeat domain-containing protein 34C.
   
 0.635
ENPP5
Ectonucleotide pyrophosphatase/phosphodiesterase family member 5.
    
 
 0.632
NTNG1
Netrin-G1 isoform X1.
   
 0.625
CDH9
Cadherin 9, type 2, T1-cadherin.
   
 
 0.555
PTPRF
LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase F.
    
 0.551
PTPRS
Receptor-type tyrosine-protein phosphatase S isoform X1.
    
 0.551
RBM28
RNA-binding protein 28 isoform X1.
      
 0.550
PTPRD
LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase delta-like.
    
 0.542
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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