Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM67Tripartite motif-containing protein 67 isoform X1. (783 aa)    
Predicted Functional Partners:
ARHGEF10
Rho guanine nucleotide exchange factor 10 isoform X1.
    
 
 0.722
SIPA1L1
LOW QUALITY PROTEIN: signal-induced proliferation-associated 1-like protein 1.
   
 
 0.710
EXOC1
Exocyst complex component 1 isoform X1.
    
   0.691
EFHD2
EF-hand domain-containing protein D2.
    
 
 0.656
SDK2
Protein sidekick-2 isoform X1.
    
 
 0.653
UBE2W
Ubiquitin-conjugating enzyme E2 W.
    
 
 0.648
FAM89A
Protein FAM89A.
      
 0.630
KIF1A
Kinesin family member 1A.
   
 
 0.620
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
   
 
 0.597
CORO1A
Coronin-1A.
    
 
 0.592
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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