STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN9Calpain-9 isoform X1. (723 aa)    
Predicted Functional Partners:
CAST
Calpastatin.
   
 0.706
ENSPCIP00000001944
annotation not available
   
0.616
ENSPCIP00000020257
annotation not available
   
0.616
CAPNS2
Calpain small subunit 2.
   
0.614
ITSN2
Intersectin-2.
   
 
  0.572
LRGUK
Leucine-rich repeat and guanylate kinase domain-containing protein isoform X1.
   
 
 0.527
NEB
Nebulin.
   
  
 0.428
PDCD6
Programmed cell death protein 6 isoform X1.
   
0.414
ENSPCIP00000027615
annotation not available
   
0.414
ENSPCIP00000052946
annotation not available
   
0.414
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.