STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD5PiggyBac transposable element-derived protein 5. (589 aa)    
Predicted Functional Partners:
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
   
 0.824
GIN1
Gypsy retrotransposon integrase-like protein 1 isoform X1.
   
 
 0.755
PGBD1
PiggyBac transposable element-derived protein 1 isoform X1.
    
 
0.707
PGBD2
PiggyBac transposable element-derived protein 2 isoform X1.
    
 
 0.695
ENSPCIP00000050551
annotation not available
   
 0.691
CD247
T-cell surface glycoprotein CD3 zeta chain.
   
 0.670
QRICH1
Glutamine-rich protein 1.
    
 
 0.644
ZMYM3
LOW QUALITY PROTEIN: zinc finger MYM-type protein 3.
    
 
 0.639
NAIF1
Nuclear apoptosis-inducing factor 1.
   
  
 0.627
SAMD11
Sterile alpha motif domain-containing protein 11 isoform X1.
    
 
 0.597
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.