STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIMS1Regulating synaptic membrane exocytosis protein 1 isoform X1. (1690 aa)    
Predicted Functional Partners:
RAB3A
Ras-related protein Rab-3A.
    
 0.949
CASK
Calcium/calmodulin-dependent serine protein kinase.
   
 0.915
UNC13B
Protein unc-13 homolog B isoform X1.
    
 0.765
ENSPCIP00000034165
annotation not available
    
 0.765
UNC13C
Protein unc-13 homolog C isoform X1.
    
 0.678
SNAP25
Synaptosomal-associated protein 25 isoform X1.
   
 
 0.671
GABRR1
Gamma-aminobutyric acid receptor subunit rho-1 isoform X1.
   
  
 0.638
STXBP1
Syntaxin-binding protein 1 isoform X1.
     
 0.609
ENSPCIP00000020527
annotation not available
    
 0.608
RIMBP2
LOW QUALITY PROTEIN: RIMS-binding protein 2.
    
 0.608
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.