Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RIMS1Regulating synaptic membrane exocytosis protein 1 isoform X1. (1690 aa)    
Predicted Functional Partners:
RAB3A
Ras-related protein Rab-3A.
   
 0.961
UNC13B
Protein unc-13 homolog B isoform X1.
   
 0.905
ENSPCIP00000034165
annotation not available
   
 0.905
ERC1
ELKS/Rab6-interacting/CAST family member 1 isoform X1.
   
 
 0.783
SNAP25
Synaptosomal-associated protein 25 isoform X1.
   
 
 0.766
ENSPCIP00000020527
annotation not available
    
 0.760
RIMBP2
LOW QUALITY PROTEIN: RIMS-binding protein 2.
    
 0.760
TSPOAP1
LOW QUALITY PROTEIN: peripheral-type benzodiazepine receptor-associated protein 1.
    
 0.760
STXBP1
Syntaxin-binding protein 1 isoform X1.
   
 
 0.747
ERC2
ELKS/RAB6-interacting/CAST family member 2.
   
 
 0.670
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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