STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000014896Cytochrome b-245 heavy chain. (259 aa)    
Predicted Functional Partners:
CYBA
Cytochrome b-245 light chain isoform X1.
   
 0.971
NOX4
NADPH oxidase 4 isoform X1.
  
 
0.953
NCF1
Neutrophil cytosol factor 1 isoform X1.
   
 0.950
NCF2
Neutrophil cytosolic factor 2.
   
 0.948
VCAM1
LOW QUALITY PROTEIN: vascular cell adhesion protein 1.
   
 0.940
NCF4
Neutrophil cytosol factor 4 isoform X1.
   
 0.938
MMP9
Matrix metalloproteinase-9 (gelatinase B).
   
 
 0.911
MAPK14
Mitogen-activated protein kinase 14 isoform X1.
   
 0.908
MAPK13
Mitogen-activated protein kinase 13.
   
 0.908
MAPK11
LOW QUALITY PROTEIN: mitogen-activated protein kinase 11.
   
 0.908
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.