STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPM5Transient receptor potential cation channel subfamily M member 5. (1162 aa)    
Predicted Functional Partners:
CALHM1
Calcium homeostasis modulator protein 1.
      
 0.703
ENSPCIP00000009348
annotation not available
 
   
 0.689
PLCB2
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X1.
   
 
 0.686
NUDT9
ADP-ribose pyrophosphatase, mitochondrial isoform X1.
 
   
 0.681
TRPA1
Transient receptor potential cation channel subfamily A member 1.
     
 0.655
ASCL3
Achaete-scute homolog 3 isoform X1.
      
 0.606
POU2F3
LOW QUALITY PROTEIN: POU domain, class 2, transcription factor 3.
    
 
 0.606
GNAT3
Guanine nucleotide-binding protein G(t) subunit alpha-3 isoform X1.
      
 0.594
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
   
  
 0.591
DCLK1
Serine/threonine-protein kinase DCLK1 isoform X1.
      
 0.590
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.