Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ALDH1A3Aldehyde dehydrogenase family 1 member A3. (512 aa)    
Predicted Functional Partners:
ALDH1A2
Retinal dehydrogenase 2.
  
 
 
0.976
AOX1
Aldehyde oxidase.
   
 
 0.975
ENSPCIP00000040312
Aldehyde oxidase 2-like isoform X1.
   
 
 0.975
ENSPCIP00000047095
Aldehyde oxidase 3-like isoform X1.
   
 
 0.975
ENSPCIP00000012915
Retinal dehydrogenase 1-like.
  
 
 
0.970
CYP26A1
Cytochrome P450 family 26 subfamily A.
   
 0.964
CYP26B1
Cytochrome P450 family 26 subfamily B.
   
 0.960
CYP26C1
Cytochrome P450 family 26 subfamily C member 1.
   
 0.942
RDH12
Retinol dehydrogenase 12 isoform X1.
   
 0.942
RDH11
Retinol dehydrogenase 11.
   
 0.942
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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