Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL1539S ribosomal protein L15, mitochondrial. (299 aa)    
Predicted Functional Partners:
MRPL13
39S ribosomal protein L13, mitochondrial isoform X1.
  
 0.991
MRPL12
39S ribosomal protein L12, mitochondrial.
  
 0.984
MRPL16
39S ribosomal protein L16, mitochondrial.
  
 0.978
MRPL17
39S ribosomal protein L17, mitochondrial.
  
 0.977
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 0.976
MRPL35
39S ribosomal protein L35, mitochondrial.
   
 0.975
MRPL3
39S ribosomal protein L3, mitochondrial.
  
 0.975
MRPL4
39S ribosomal protein L4, mitochondrial.
  
 0.975
MRPL23
39S ribosomal protein L23, mitochondrial.
   
 0.974
MRPL19
39S ribosomal protein L19, mitochondrial.
   
 0.968
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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