STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAP130Histone deacetylase complex subunit SAP130 isoform X1. (1058 aa)    
Predicted Functional Partners:
SAP30
LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30.
    
 0.837
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.809
SINHCAF
Protein FAM60A.
    
 
 0.777
SAP30L
Histone deacetylase complex subunit SAP30L.
    
 0.763
SUDS3
LOW QUALITY PROTEIN: sin3 histone deacetylase corepressor complex component SDS3.
   
 0.722
ING2
Inhibitor of growth protein 2.
    
 
 0.679
SIN3A
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a.
   
 0.674
SIN3B
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3b.
   
 0.674
OR52W1
Olfactory receptor 52W1.
      
 0.654
D2HGDH
D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1.
    
 
 0.628
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.