Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TYW5TRNA wybutosine-synthesizing protein 5. (314 aa)    
Predicted Functional Partners:
LCMT2
TRNA wybutosine-synthesizing protein 4.
 
    
 0.939
USE1
Unconventional SNARE in the endoplasmic reticulum protein 1.
    
   0.813
TRMT5
TRNA (guanine(37)-N1)-methyltransferase isoform X1.
      
 0.756
IP6K3
LOW QUALITY PROTEIN: inositol hexakisphosphate kinase 3.
      
 0.744
TRMT12
TRNA wybutosine-synthesizing protein 2 homolog isoform X1.
 
    
 0.743
C2orf69
UPF0565 protein C2orf69 homolog.
      
 0.634
TYW1
LOW QUALITY PROTEIN: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase.
      
 0.627
RIOX2
Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA.
      
 0.622
TYW3
TRNA wybutosine-synthesizing protein 3 homolog isoform X1.
      
 0.621
SLC38A7
Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 7/8.
      
 0.585
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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