STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIRREL1Kin of IRRE-like protein 1 isoform X1. (755 aa)    
Predicted Functional Partners:
NPHS1
Nephrin isoform X1.
   
0.975
TJP1
Tight junction protein ZO-1 isoform X1.
    
 0.838
CD2AP
CD2 associated protein.
    
 0.747
NPHS2
Podocin.
    
 0.725
CD5L
CD5 antigen-like.
   
  
 0.641
IER5
Immediate early response gene 5 protein.
      
 0.621
STX6
Syntaxin 6.
      
 0.621
FAT1
Protocadherin Fat 1 isoform X1.
   
 
 0.589
NCK1
Cytoplasmic protein NCK1 isoform X1.
    
 0.568
GRB2
Growth factor receptor-binding protein 2.
   
 0.536
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.