Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NICN1Nicolin-1 isoform X1. (215 aa)    
Predicted Functional Partners:
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 0.968
ENSPCIP00000039616
Tubulin polyglutamylase complex subunit 2-like isoform X1.
    
 0.968
TTLL1
Probable tubulin polyglutamylase TTLL1 isoform X1.
   
 0.967
LRRC49
Leucine-rich repeat-containing protein 49 isoform X1.
    
 0.966
KIAA1841
LOW QUALITY PROTEIN: uncharacterized protein KIAA1841 homolog.
    
   0.911
TBC1D19
TBC1 domain family member 19 isoform X1.
    
   0.911
TPGS2
Tubulin polyglutamylase complex subunit 2 isoform X1.
    
 0.905
C11orf49
UPF0705 protein C11orf49 homolog isoform X1.
    
   0.788
SMG8
LOW QUALITY PROTEIN: protein SMG8.
    
   0.758
FTSJ3
AdoMet-dependent rRNA methyltransferase SPB1.
      
 0.743
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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