Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUSD6Sushi domain-containing protein 6. (302 aa)    
Predicted Functional Partners:
NEDD4L
E3 ubiquitin-protein ligase NEDD4-like isoform X1.
    
 
 0.787
ANKRD9
Ankyrin repeat domain-containing protein 9.
    
 0.641
JAKMIP2
Janus kinase and microtubule-interacting protein 2 isoform X1.
      
 0.620
NEDD4
E3 ubiquitin-protein ligase NEDD4 isoform X1.
    
 
 0.598
CCDC59
Thyroid transcription factor 1-associated protein 26 isoform X1.
      
 0.546
MRPL10
39S ribosomal protein L10, mitochondrial.
   
  
 0.526
DEXI
Dexamethasone-induced protein.
      
 0.523
PEX2
Peroxisome biogenesis factor 2.
      
 0.519
STK32C
Serine/threonine-protein kinase 32C isoform X1.
      
 0.479
TNR
Tenascin-R isoform X1.
    
  0.460
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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