STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC10A1Solute carrier family 10 (sodium/bile acid cotransporter), member 1. (350 aa)    
Predicted Functional Partners:
ENSPCIP00000021604
annotation not available
   
  
 0.728
ABCB11
ATP-binding cassette, subfamily B (MDR/TAP), member 11.
   
  
 0.667
CYP7A1
Cholesterol 7-alpha-monooxygenase.
   
  
 0.642
NR1H4
Bile acid receptor isoform X1.
   
  
 0.602
SLCO1A2
Solute carrier organic anion transporter family member 1A2.
   
  
 0.597
NR0B2
Nuclear receptor subfamily 0 group B member 2.
   
  
 0.575
PLEKHD1
Pleckstrin homology domain-containing family D member 1 isoform X1.
      
 0.564
SLC10A7
Solute carrier family 10 member 7.
      
 0.563
FABP6
Fatty acid-binding protein 6, ileal (gastrotropin).
   
  
 0.548
OTC
Ornithine carbamoyltransferase, mitochondrial isoform X1.
   
  
 0.537
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.