Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
PDIK1LLOW QUALITY PROTEIN: serine/threonine-protein kinase PDIK1L. (341 aa)    
Predicted Functional Partners:
CTDSPL2
CTD small phosphatase-like protein 2 isoform X1.
   
 
 0.921
CUNH1orf174
UPF0688 protein C1orf174 homolog.
    
   0.834
FKBP5
Peptidyl-prolyl cis-trans isomerase FKBP5.
    
   0.758
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.745
BECN1
Beclin-1.
    
 0.745
PIK3R4
Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.
    
 0.745
ATG13
LOW QUALITY PROTEIN: autophagy-related protein 13.
   
 0.731
RB1CC1
RB1-inducible coiled-coil protein 1 isoform X1.
   
 0.727
ATG101
Autophagy-related protein 101 isoform X1.
    
 0.716
ATG3
Ubiquitin-like-conjugating enzyme ATG3.
   
 
 0.642
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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