STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIX1LLIX1-like protein isoform X1. (339 aa)    
Predicted Functional Partners:
C1orf109
Uncharacterized protein C1orf109 homolog.
   
    0.698
RUBCNL
Protein RUBCNL-like isoform X1.
   
    0.676
FAT3
LOW QUALITY PROTEIN: protocadherin Fat 3.
   
 0.591
MOB1B
MOB kinase activator 1B isoform X1.
      
 0.564
CWC25
Pre-mRNA-splicing factor CWC25 homolog.
   
    0.540
ENSPCIP00000034116
Transmembrane and coiled-coil domain-containing protein 5B-like.
   
    0.540
ENSPCIP00000040571
annotation not available
   
    0.540
ALG11
LOW QUALITY PROTEIN: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase.
   
    0.525
ACOT12
Acyl-coenzyme A thioesterase 12 isoform X1.
   
    0.511
ACOT11
Acyl-coenzyme A thioesterase 11.
   
    0.511
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.