Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITGA10Integrin alpha-10 isoform X1. (1166 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta-1 isoform X1.
   
 0.995
PTK2
Focal adhesion kinase 1 isoform X1.
   
 0.877
ITGB7
LOW QUALITY PROTEIN: integrin beta-7.
   
 0.872
ITGB3
Integrin beta 3.
   
 0.865
COL9A3
Collagen alpha-3(IX) chain isoform X1.
    
 0.863
ITGB5
Integrin beta 5.
   
 0.849
ITGB6
Integrin beta 6.
   
 0.842
TLN2
LOW QUALITY PROTEIN: talin-2.
   
 0.835
TLN1
LOW QUALITY PROTEIN: talin-1.
   
 0.835
ITGB2
Integrin beta-2 isoform X1.
   
 0.833
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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