STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXCR5C-X-C chemokine receptor type 5. (391 aa)    
Predicted Functional Partners:
CXCL12
Stromal cell-derived factor 1 isoform X1.
    
 0.952
GNAQ
Guanine nucleotide-binding protein G(q) subunit alpha.
    
  0.914
CCL5
C-C motif chemokine 5-like.
    
 0.904
CXCL9
C-X-C motif chemokine 9 isoform X1.
    
 0.902
CXCL10
C-X-C motif chemokine 10.
    
 0.899
CCL21
C-C motif chemokine 21.
    
 0.874
CCL20
C-C motif chemokine 20 isoform X1.
    
 0.863
ENSPCIP00000048023
Uncharacterized protein LOC110194570.
     
 0.858
ENSPCIP00000050508
C-X-C motif chemokine 1/2/3.
     
 0.844
CCR7
C-C chemokine receptor type 7.
   
 
0.836
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.