STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERCC4DNA excision repair protein ERCC-4. (898 aa)    
Predicted Functional Partners:
ERCC1
DNA excision repair protein ERCC-1.
   
 0.999
XPA
DNA repair protein complementing XP-A cells isoform X1.
    
 0.991
SLX4
Structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12).
   
 0.977
MUS81
Crossover junction endonuclease MUS81 isoform X1.
    
 0.974
WRN
Werner syndrome ATP-dependent helicase.
   
 0.966
RAD52
DNA repair protein RAD52 homolog isoform X1.
   
 0.959
ERCC5
DNA repair protein complementing XP-G cells isoform X1.
   
 0.959
TOP3A
DNA topoisomerase 3-alpha.
    
 0.954
RPA1
Replication protein A 70 kDa DNA-binding subunit isoform X1.
    
 0.953
FAAP24
FA core complex associated protein 24.
   
 0.942
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.