STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000015866annotation not available (345 aa)    
Predicted Functional Partners:
GRIA1
Glutamate receptor 1 isoform X1.
    
 0.825
PRPF19
Pre-mRNA-processing factor 19.
 
      0.791
TMED10
Transmembrane emp24 domain-containing protein 10.
   
 0.781
TGFA
Protransforming growth factor alpha isoform X1.
     
 0.748
AREG
LOW QUALITY PROTEIN: amphiregulin.
     
 0.688
GRIA4
Glutamate receptor 4 isoform X1.
    
 0.680
GRIA3
Glutamate receptor 3 isoform X1.
    
 0.679
SEC24D
Protein transport protein Sec24D.
     
 0.649
SEC24C
LOW QUALITY PROTEIN: protein transport protein Sec24C.
     
 0.649
ENSPCIP00000019083
annotation not available
    
 0.623
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.