STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD40Ankyrin repeat domain-containing protein 40 isoform X1. (362 aa)    
Predicted Functional Partners:
SEC24B
SEC24 homolog B, COPII coat complex component.
   
 0.875
SEC24A
SEC24 homolog A, COPII coat complex component.
   
 0.875
SEC23B
Protein transport protein Sec23B.
   
 0.870
SEC23A
Protein transport protein Sec23A.
   
 0.870
SEC13
Protein SEC13 homolog isoform X1.
    
 0.843
ENSPCIP00000046094
annotation not available
    
 0.843
SAR1B
GTP-binding protein SAR1b.
   
 0.773
ENSPCIP00000020090
annotation not available
   
 0.773
ENSPCIP00000029335
annotation not available
   
 0.773
SEC24D
Protein transport protein Sec24D.
   
 0.745
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.