STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A11LOW QUALITY PROTEIN: sodium bicarbonate transporter-like protein 11. (878 aa)    
Predicted Functional Partners:
AGBL1
ATP/GTP binding protein like 1.
   
  
 0.606
LOXHD1
LOW QUALITY PROTEIN: lipoxygenase homology domain-containing protein 1.
      
 0.552
B3GLCT
UDP-glucose:O-linked fucose beta-1,3-glucosyltransferase.
      
 0.550
KCTD2
LOW QUALITY PROTEIN: BTB/POZ domain-containing protein KCTD2.
   
 0.530
KANK4
LOW QUALITY PROTEIN: KN motif and ankyrin repeat domain-containing protein 4.
    
 0.449
ZEB1
Zinc finger E-box-binding homeobox 1 isoform X1.
      
 0.424
ATP6V1C2
LOW QUALITY PROTEIN: V-type proton ATPase subunit C 2.
      
 0.420
KERA
Keratocan.
     
 0.420
ENSPCIP00000015111
Lipoxygenase homology domain-containing protein 1 isoform X1.
      
 0.414
TMEM178A
Transmembrane protein 178A.
      
 0.412
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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