STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS16A disintegrin and metalloproteinase with thrombospondin motifs 16. (1228 aa)    
Predicted Functional Partners:
PCDH7
Protocadherin-7 isoform X1.
    
 
 0.562
HIVEP3
Human immunodeficiency virus type I enhancer-binding protein.
      
 0.553
TET2
Methylcytosine dioxygenase TET2 isoform X1.
      
 0.552
CREB3L2
Cyclic AMP-responsive element-binding protein 3-like protein 2 isoform X1.
      
 0.548
CREB3
Cyclic AMP-responsive element-binding protein 3 isoform X1.
   
  
 0.542
SALL4
Sal-like protein 4 isoform X1.
   
  
 0.534
NID1
Nidogen (entactin).
    
 
 0.519
GPR84
G protein-coupled receptor 84.
      
 0.512
USH1C
USH1 protein network component harmonin.
      
 0.512
KIT
Mast/stem cell growth factor receptor Kit isoform X1.
   
  
 0.507
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.