STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX8DNA-binding protein RFX8 isoform X1. (547 aa)    
Predicted Functional Partners:
ATR
LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR.
    
 
 0.634
TUSC1
Tumor suppressor candidate 1.
      
 0.561
PIGQ
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X1.
      
 0.561
RFX5
LOW QUALITY PROTEIN: DNA-binding protein RFX5.
      
 0.561
LENG1
Leukocyte receptor cluster member 1.
      
 0.558
CHEK2
Serine/threonine-protein kinase Chk2 isoform X1.
   
 
 0.547
KRT85
Keratin, type II cuticular Hb5 isoform X1.
      
 0.506
PDAP1
28 kDa heat- and acid-stable phosphoprotein.
      
 0.502
ZMYM3
LOW QUALITY PROTEIN: zinc finger MYM-type protein 3.
      
 0.471
ACSS3
Acyl-CoA synthetase short-chain family member 3, mitochondrial.
      
 0.461
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.