STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C17orf64Uncharacterized protein C17orf64 homolog. (237 aa)    
Predicted Functional Partners:
SSRP1
Structure-specific recognition protein 1.
   
 
 0.680
SUPT16H
FACT complex subunit SPT16.
   
 
 0.627
ENSPCIP00000046034
annotation not available
    
 0.626
DDX6
Probable ATP-dependent RNA helicase DDX6.
   
 0.618
INO80C
INO80 complex subunit C isoform X1.
    
 0.604
SUPT5H
LOW QUALITY PROTEIN: transcription elongation factor SPT5.
   
 
 0.597
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
   
 0.589
LEO1
RNA polymerase-associated protein LEO1.
   
 
 0.582
ARID4A
AT-rich interactive domain-containing protein 4A.
   
 0.580
BAZ1A
Bromodomain adjacent to zinc finger domain protein 1A isoform X1.
   
 0.577
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.