STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1GProtein phosphatase 1G isoform X1. (547 aa)    
Predicted Functional Partners:
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
  
 0.728
USP7
Ubiquitin carboxyl-terminal hydrolase 7.
   
 0.686
SF3A2
Splicing factor 3A subunit 2.
   
  
 0.605
PPIL4
Peptidyl-prolyl cis-trans isomerase-like 4.
   
 0.575
SIRT7
LOW QUALITY PROTEIN: NAD-dependent protein deacetylase sirtuin-7.
    
 
 0.570
MMGT1
Membrane magnesium transporter 1.
      
 0.553
THRAP3
Thyroid hormone receptor-associated protein 3.
   
  
 0.536
MTFMT
Methionyl-tRNA formyltransferase, mitochondrial isoform X1.
  
   0.522
SAC3D1
SAC3 domain-containing protein 1.
      
 0.516
PPP4C
Serine/threonine-protein phosphatase 4 catalytic subunit.
   
 
 0.505
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.