STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRPK2Serine/threonine-protein kinase SRPK2. (732 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5-like protein.
    
   0.775
U2AF2
Splicing factor U2AF 65 kDa subunit isoform X1.
    
 
 0.755
SRSF6
Splicing factor, arginine/serine-rich 4/5/6.
   
 
 0.656
SRSF5
Serine/arginine-rich splicing factor 5 isoform X1.
   
 
 0.656
SRSF4
Serine/arginine-rich splicing factor 4 isoform X1.
   
 
 0.656
ZNF318
Zinc finger protein 318 isoform X1.
    
 
 0.618
RBM23
Probable RNA-binding protein 23 isoform X1.
    
 
 0.536
RBM39
RNA-binding protein 39 isoform X1.
    
 
 0.536
SRSF1
Splicing factor, arginine/serine-rich 1.
    
 
 0.531
SRSF9
Splicing factor, arginine/serine-rich 9.
    
 
 0.508
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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