STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF2H1LOW QUALITY PROTEIN: general transcription factor IIH subunit 1. (547 aa)    
Predicted Functional Partners:
ERCC3
TFIIH basal transcription factor complex helicase XPB subunit isoform X1.
   
 0.999
GTF2H4
General transcription factor IIH subunit 4.
    
 0.999
ERCC2
TFIIH basal transcription factor complex helicase XPD subunit isoform X1.
    
 0.999
GTF2H2
General transcription factor IIH subunit 2 isoform X1.
    
 0.999
GTF2H3
General transcription factor IIH subunit 3 isoform X1.
    
 0.999
MNAT1
LOW QUALITY PROTEIN: CDK-activating kinase assembly factor MAT1.
    
 0.998
GTF2E1
Transcription initiation factor TFIIE subunit alpha.
   
 0.997
GTF2E2
Transcription initiation factor TFIIE subunit beta.
    
 0.995
CCNH
Cyclin H.
    
 0.993
ERCC5
DNA repair protein complementing XP-G cells isoform X1.
    
 0.992
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.