STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX8Transcription factor SOX7/8/10/18 (SOX group E/F). (474 aa)    
Predicted Functional Partners:
WT1
Wilms tumor protein isoform X1.
    
 0.612
CTNNB1
LOW QUALITY PROTEIN: catenin beta-1.
    
 0.563
ENSPCIP00000001375
annotation not available
      
 0.553
EGR2
E3 SUMO-protein ligase EGR2 isoform X1.
    
 0.535
RUNX3
LOW QUALITY PROTEIN: runt-related transcription factor 3.
   
 0.533
RUNX2
Runt-related transcription factor 2 isoform X1.
   
 0.533
RUNX1
Runt-related transcription factor 1 isoform X1.
   
 0.533
OLIG1
Class B basic helix-loop-helix protein 1/6/7.
   
 0.526
OLIG2
Class B basic helix-loop-helix protein 1/6/7.
   
 0.526
DMRT1
Doublesex- and mab-3-related transcription factor 1.
    
 0.508
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.