STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALB1Calbindin. (261 aa)    
Predicted Functional Partners:
SST
Somatostatin.
   
  
 0.704
PVALB
Parvalbumin alpha.
      
 0.699
S100G
Protein S100-G.
   
 0.696
CASK
Calcium/calmodulin-dependent serine protein kinase.
    
 0.678
NTS
Neurotensin/neuromedin N.
      
 0.630
ENSPCIP00000019710
annotation not available
   
 0.607
GAD1
Glutamate decarboxylase 1.
   
 
 0.601
SDF4
45 kDa calcium-binding protein.
      
 0.584
RCVRN
Recoverin.
   
 0.567
WDR90
WD repeat-containing protein 90.
   
 0.567
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.