Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGRN | NCAM1 | ENSPCIP00000020216 | ENSPCIP00000025958 | Agrin isoform X1. | LOW QUALITY PROTEIN: neural cell adhesion molecule 1. | 0.622 |
AGRN | NCAM2 | ENSPCIP00000020216 | ENSPCIP00000018482 | Agrin isoform X1. | Neural cell adhesion molecule 2. | 0.581 |
CNTN2 | L1CAM | ENSPCIP00000005288 | ENSPCIP00000004532 | Contactin 2. | Neural cell adhesion molecule L1 isoform X1. | 0.986 |
CNTN2 | NCAM1 | ENSPCIP00000005288 | ENSPCIP00000025958 | Contactin 2. | LOW QUALITY PROTEIN: neural cell adhesion molecule 1. | 0.654 |
CNTN2 | NCAM2 | ENSPCIP00000005288 | ENSPCIP00000018482 | Contactin 2. | Neural cell adhesion molecule 2. | 0.624 |
CNTN2 | NCAN | ENSPCIP00000005288 | ENSPCIP00000032633 | Contactin 2. | Neurocan core protein isoform X1. | 0.425 |
CNTN2 | ST8SIA4 | ENSPCIP00000005288 | ENSPCIP00000031888 | Contactin 2. | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4. | 0.420 |
FGFR1 | L1CAM | ENSPCIP00000010765 | ENSPCIP00000004532 | Fibroblast growth factor receptor 1 isoform X1. | Neural cell adhesion molecule L1 isoform X1. | 0.411 |
FGFR1 | NCAM1 | ENSPCIP00000010765 | ENSPCIP00000025958 | Fibroblast growth factor receptor 1 isoform X1. | LOW QUALITY PROTEIN: neural cell adhesion molecule 1. | 0.668 |
FGFR1 | NCAM2 | ENSPCIP00000010765 | ENSPCIP00000018482 | Fibroblast growth factor receptor 1 isoform X1. | Neural cell adhesion molecule 2. | 0.520 |
FGFR2 | L1CAM | ENSPCIP00000004895 | ENSPCIP00000004532 | LOW QUALITY PROTEIN: fibroblast growth factor receptor 2. | Neural cell adhesion molecule L1 isoform X1. | 0.411 |
FGFR2 | NCAM1 | ENSPCIP00000004895 | ENSPCIP00000025958 | LOW QUALITY PROTEIN: fibroblast growth factor receptor 2. | LOW QUALITY PROTEIN: neural cell adhesion molecule 1. | 0.668 |
FGFR2 | NCAM2 | ENSPCIP00000004895 | ENSPCIP00000018482 | LOW QUALITY PROTEIN: fibroblast growth factor receptor 2. | Neural cell adhesion molecule 2. | 0.520 |
L1CAM | CNTN2 | ENSPCIP00000004532 | ENSPCIP00000005288 | Neural cell adhesion molecule L1 isoform X1. | Contactin 2. | 0.986 |
L1CAM | FGFR1 | ENSPCIP00000004532 | ENSPCIP00000010765 | Neural cell adhesion molecule L1 isoform X1. | Fibroblast growth factor receptor 1 isoform X1. | 0.411 |
L1CAM | FGFR2 | ENSPCIP00000004532 | ENSPCIP00000004895 | Neural cell adhesion molecule L1 isoform X1. | LOW QUALITY PROTEIN: fibroblast growth factor receptor 2. | 0.411 |
L1CAM | NCAM1 | ENSPCIP00000004532 | ENSPCIP00000025958 | Neural cell adhesion molecule L1 isoform X1. | LOW QUALITY PROTEIN: neural cell adhesion molecule 1. | 0.980 |
L1CAM | NCAM2 | ENSPCIP00000004532 | ENSPCIP00000018482 | Neural cell adhesion molecule L1 isoform X1. | Neural cell adhesion molecule 2. | 0.948 |
L1CAM | NCAN | ENSPCIP00000004532 | ENSPCIP00000032633 | Neural cell adhesion molecule L1 isoform X1. | Neurocan core protein isoform X1. | 0.647 |
NCAM1 | AGRN | ENSPCIP00000025958 | ENSPCIP00000020216 | LOW QUALITY PROTEIN: neural cell adhesion molecule 1. | Agrin isoform X1. | 0.622 |
page 1 of 3