STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIBP2Liprin-beta-2 isoform X1. (1000 aa)    
Predicted Functional Partners:
PPFIA4
LOW QUALITY PROTEIN: liprin-alpha-4.
   
0.667
PPFIA3
Liprin-alpha-3 isoform X1.
   
 0.667
PPFIA1
LOW QUALITY PROTEIN: liprin-alpha-1.
   
0.667
PPFIA2
PTPRF interacting protein alpha 2.
   
0.667
ENSPCIP00000048758
annotation not available
   
0.667
KAZN
Kazrin isoform X1.
   
0.606
ENSPCIP00000038839
annotation not available
   
 0.606
PTPRD
LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase delta-like.
     
 0.502
COG6
Conserved oligomeric Golgi complex subunit 6.
      
 0.471
SMCO2
Single-pass membrane and coiled-coil domain-containing protein 2 isoform X1.
      
 0.459
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.