STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000018925LOW QUALITY PROTEIN: lysine-specific demethylase 5C-like. (1545 aa)    
Predicted Functional Partners:
ATP5F1C
ATP synthase subunit gamma, mitochondrial isoform X1.
  
 0.929
ATP5F1A
F-type H+-transporting ATPase subunit alpha.
  
 0.858
ENSPCIP00000024130
annotation not available
  
 0.858
ATP5PD
F-type H+-transporting ATPase subunit d.
   
 0.843
ATP5O
F-type H+-transporting ATPase subunit O.
  
 0.806
ENSPCIP00000023027
annotation not available
  
 0.806
ENSPCIP00000043200
ATP synthase subunit O, mitochondrial-like.
  
 0.806
ATP5F1E
F-type H+-transporting ATPase subunit epsilon.
    
 0.786
ENSPCIP00000012301
annotation not available
  
 0.777
ATP5F1D
F-type H+-transporting ATPase subunit delta.
  
 0.777
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.