STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNASEH2BRibonuclease H2 subunit B isoform X1. (314 aa)    
Predicted Functional Partners:
RNASEH2A
Ribonuclease H2 subunit A.
   
 
 0.998
PCNA
Proliferating cell nuclear antigen.
   
 
 0.838
BLM
Bloom syndrome protein.
   
 
 0.742
SAMHD1
Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1.
      
 0.732
PGS1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial.
   
  
 0.729
RFC3
Replication factor C subunit 3/5.
   
  
 0.664
WRN
Werner syndrome ATP-dependent helicase.
   
 
 0.660
ENSPCIP00000046034
annotation not available
   
 
 0.628
FEN1
Flap endonuclease 1.
   
 
 0.623
POLD1
DNA polymerase delta catalytic subunit isoform X1.
   
 
 0.590
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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