ENSPCIP00000019279 protein (Phascolarctos cinereus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPCIP00000019279

Uncharacterized protein KIAA1614 homolog. (1230 aa)

Predicted Functional Partners:

RIMS2

0.573

GART

0.545

POLR2F

0.539

APBA3

0.482

APBA2

0.482

APBA1

0.482

LIN7B

0.471

LIN7C

0.471

LIN7A

0.471

GRIN1

0.470

Your Current Organism:

Phascolarctos cinereus

NCBI taxonomy Id: 38626
Other names: P. cinereus, koala

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APBA1	ENSPCIP00000019279	ENSPCIP00000041504	ENSPCIP00000019279	LOW QUALITY PROTEIN: amyloid beta A4 precursor protein-binding family A member 1.	Uncharacterized protein KIAA1614 homolog.	0.482
APBA1	LIN7A	ENSPCIP00000041504	ENSPCIP00000039731	LOW QUALITY PROTEIN: amyloid beta A4 precursor protein-binding family A member 1.	Protein lin-7 homolog A isoform X1.	0.842
APBA1	LIN7B	ENSPCIP00000041504	ENSPCIP00000008837	LOW QUALITY PROTEIN: amyloid beta A4 precursor protein-binding family A member 1.	Protein lin-7 homolog B isoform X1.	0.700
APBA1	LIN7C	ENSPCIP00000041504	ENSPCIP00000035496	LOW QUALITY PROTEIN: amyloid beta A4 precursor protein-binding family A member 1.	Protein lin-7 homolog C.	0.700
APBA1	RIMS2	ENSPCIP00000041504	ENSPCIP00000035426	LOW QUALITY PROTEIN: amyloid beta A4 precursor protein-binding family A member 1.	Regulating synaptic membrane exocytosis protein 2 isoform X1.	0.931
APBA2	ENSPCIP00000019279	ENSPCIP00000037000	ENSPCIP00000019279	Amyloid beta A4 precursor protein-binding family A member 2 isoform X1.	Uncharacterized protein KIAA1614 homolog.	0.482
APBA2	LIN7A	ENSPCIP00000037000	ENSPCIP00000039731	Amyloid beta A4 precursor protein-binding family A member 2 isoform X1.	Protein lin-7 homolog A isoform X1.	0.565
APBA2	LIN7B	ENSPCIP00000037000	ENSPCIP00000008837	Amyloid beta A4 precursor protein-binding family A member 2 isoform X1.	Protein lin-7 homolog B isoform X1.	0.565
APBA2	LIN7C	ENSPCIP00000037000	ENSPCIP00000035496	Amyloid beta A4 precursor protein-binding family A member 2 isoform X1.	Protein lin-7 homolog C.	0.565
APBA2	RIMS2	ENSPCIP00000037000	ENSPCIP00000035426	Amyloid beta A4 precursor protein-binding family A member 2 isoform X1.	Regulating synaptic membrane exocytosis protein 2 isoform X1.	0.931
APBA3	ENSPCIP00000019279	ENSPCIP00000034307	ENSPCIP00000019279	Amyloid beta A4 precursor protein-binding family A member 3.	Uncharacterized protein KIAA1614 homolog.	0.482
APBA3	LIN7A	ENSPCIP00000034307	ENSPCIP00000039731	Amyloid beta A4 precursor protein-binding family A member 3.	Protein lin-7 homolog A isoform X1.	0.565
APBA3	LIN7B	ENSPCIP00000034307	ENSPCIP00000008837	Amyloid beta A4 precursor protein-binding family A member 3.	Protein lin-7 homolog B isoform X1.	0.565
APBA3	LIN7C	ENSPCIP00000034307	ENSPCIP00000035496	Amyloid beta A4 precursor protein-binding family A member 3.	Protein lin-7 homolog C.	0.565
APBA3	RIMS2	ENSPCIP00000034307	ENSPCIP00000035426	Amyloid beta A4 precursor protein-binding family A member 3.	Regulating synaptic membrane exocytosis protein 2 isoform X1.	0.931
ENSPCIP00000019279	APBA1	ENSPCIP00000019279	ENSPCIP00000041504	Uncharacterized protein KIAA1614 homolog.	LOW QUALITY PROTEIN: amyloid beta A4 precursor protein-binding family A member 1.	0.482
ENSPCIP00000019279	APBA2	ENSPCIP00000019279	ENSPCIP00000037000	Uncharacterized protein KIAA1614 homolog.	Amyloid beta A4 precursor protein-binding family A member 2 isoform X1.	0.482
ENSPCIP00000019279	APBA3	ENSPCIP00000019279	ENSPCIP00000034307	Uncharacterized protein KIAA1614 homolog.	Amyloid beta A4 precursor protein-binding family A member 3.	0.482
ENSPCIP00000019279	GART	ENSPCIP00000019279	ENSPCIP00000016762	Uncharacterized protein KIAA1614 homolog.	Trifunctional purine biosynthetic protein adenosine-3.	0.545
ENSPCIP00000019279	GRIN1	ENSPCIP00000019279	ENSPCIP00000007333	Uncharacterized protein KIAA1614 homolog.	Glutamate receptor ionotropic, NMDA 1 isoform X1.	0.470