STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSM10U7 snRNA-associated Sm-like protein LSm10 isoform X1. (136 aa)    
Predicted Functional Partners:
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.997
LSM11
LOW QUALITY PROTEIN: U7 snRNA-associated Sm-like protein LSm11.
     
 0.969
ENSPCIP00000022515
annotation not available
   
 0.968
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.968
SNRPD2
Small nuclear ribonucleoprotein Sm D2.
   
 0.967
ENSPCIP00000041923
annotation not available
   
 0.967
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.965
NCBP1
Nuclear cap-binding protein subunit 1.
    
 0.961
CLNS1A
Chloride channel, nucleotide-sensitive, 1A.
   
 0.959
LSM2
U6 snRNA-associated Sm-like protein LSm2.
   
 0.959
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.