STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNJCyclin-J isoform X1. (384 aa)    
Predicted Functional Partners:
CDC6
LOW QUALITY PROTEIN: cell division control protein 6 homolog.
   
 0.765
SKP2
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2).
   
 0.723
ENSPCIP00000008521
annotation not available
   
 0.717
ANAPC1
Anaphase-promoting complex subunit 1 isoform X1.
    
 0.664
ENSPCIP00000010551
Glycine N-acyltransferase-like protein 2.
   
 0.658
CKS2
Cyclin-dependent kinase regulatory subunit CKS1.
   
 0.658
CKS1B
Cyclin-dependent kinases regulatory subunit 1 isoform X1.
   
 0.658
ORC1
Origin recognition complex subunit 1.
   
 0.658
ANAPC4
Anaphase-promoting complex subunit 4 isoform X1.
    
 0.655
CDC27
Cell division cycle protein 27 homolog isoform X1.
    
 0.642
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.