STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000019914annotation not available (71 aa)    
Predicted Functional Partners:
DDX20
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX20.
    
 0.905
SNRPD1
Small nuclear ribonucleoprotein Sm D1 isoform X1.
   
 0.903
SPATA6L
Spermatogenesis associated 6-like protein isoform X1.
    
 0.901
GEMIN2
Gem associated protein 2.
    
 0.876
CLNS1A
Chloride channel, nucleotide-sensitive, 1A.
   
 0.820
LSM10
U7 snRNA-associated Sm-like protein LSm10 isoform X1.
   
 0.792
GEMIN4
LOW QUALITY PROTEIN: gem-associated protein 4.
    
 0.784
GEMIN8
Gem associated protein 8.
    
 0.782
SNRPD2
Small nuclear ribonucleoprotein Sm D2.
   
 0.777
ENSPCIP00000041923
annotation not available
   
 0.777
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.