STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JADE1Protein Jade-1 isoform X1. (871 aa)    
Predicted Functional Partners:
KAT7
Histone acetyltransferase KAT7 isoform X1.
    
 0.954
MEAF6
Chromatin modification-related protein MEAF6 isoform X1.
    
 0.910
ING4
Inhibitor of growth family member 4.
    
 0.742
ING5
Inhibitor of growth protein 5 isoform X1.
    
 0.742
KAT8
LOW QUALITY PROTEIN: histone acetyltransferase KAT8.
    
 0.663
KAT5
Histone acetyltransferase KAT5 isoform X1.
    
 0.663
SFMBT2
Scm-like with four MBT domains protein 2.
      
 0.553
VHL
Von Hippel-Lindau disease tumor suppressor.
    
 
 0.539
SMOC1
SPARC related modular calcium binding 1.
      
 0.499
PACC1
Transmembrane protein 206.
      
 0.493
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.