STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDLBPVigilin. (1341 aa)    
Predicted Functional Partners:
DDX6
Probable ATP-dependent RNA helicase DDX6.
   
 
 0.685
APOA1
Apolipoprotein A-I.
     
 0.668
EEF1G
Elongation factor 1-gamma.
   
 
 0.659
RACK1
Guanine nucleotide-binding protein subunit beta-2-like 1 protein.
   
 
 0.639
DNAJC2
DnaJ homolog subfamily C member 2 isoform X1.
   
   0.639
ENSPCIP00000038828
annotation not available
   
 
 0.639
ENSPCIP00000042474
annotation not available
   
 
 0.639
APOA4
Apolipoprotein A-IV isoform X1.
     
 0.595
SAE1
Ubiquitin-like 1-activating enzyme E1 A.
    
 
 0.593
EIF6
Eukaryotic translation initiation factor 6.
      
 0.576
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.