STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000020257annotation not available (251 aa)    
Predicted Functional Partners:
CAPN8
LOW QUALITY PROTEIN: calpain-8.
 
 
 0.972
CAST
Calpastatin.
   
 0.757
CAPN1
Calpain-1 catalytic subunit isoform X1.
   
0.747
CAPN2
Calpain 2.
   
0.747
CAPN5
LOW QUALITY PROTEIN: calpain-5.
 
 
 0.730
CAPN12
Calpain 12.
 
 
0.724
CAPN6
Calpain-6.
 
 
 0.718
CAPN7
Calpain-7 isoform X1.
   
 0.686
CAPN10
Calpain 10.
 
 
 0.667
CAPN15
Calpain-15 isoform X1.
   
 0.637
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.