STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCRLLOW QUALITY PROTEIN: inositol polyphosphate 5-phosphatase OCRL-1. (901 aa)    
Predicted Functional Partners:
SACM1L
Phosphatidylinositide phosphatase SAC1.
 
  
 0.991
INPP5B
Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X1.
  
 
 
0.956
PIK3C2A
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha isoform X1.
     
 0.947
PIK3C2B
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta isoform X1.
     
 0.946
SYNJ2
LOW QUALITY PROTEIN: synaptojanin-2.
    
0.937
SYNJ1
Synaptojanin-1 isoform X1.
    
0.937
INPP4A
Type I inositol 3,4-bisphosphate 4-phosphatase isoform X1.
     
 0.917
INPP4B
LOW QUALITY PROTEIN: type II inositol 3,4-bisphosphate 4-phosphatase.
     
 0.916
INPP5E
72 kDa inositol polyphosphate 5-phosphatase isoform X1.
     
0.913
PIP5K1A
1-phosphatidylinositol-4-phosphate 5-kinase.
     
 0.910
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.