STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP1Ribosomal RNA processing protein 1 homolog A. (679 aa)    
Predicted Functional Partners:
BRIX1
Ribosome biogenesis protein BRX1 homolog.
   
 
 0.983
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 
 0.982
RSL1D1
Ribosomal L1 domain-containing protein 1.
   
 
 0.980
WDR74
Ribosome biogenesis protein NSA1.
   
 
 0.978
NIFK
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
 
 0.977
RPF1
Ribosome production factor 1.
   
 
 0.972
MAK16
Protein MAK16 homolog isoform X1.
   
 
 0.969
MRTO4
MRNA turnover protein 4 homolog.
   
 
 0.965
RSL24D1
Probable ribosome biogenesis protein RLP24.
   
 
 0.963
GTPBP4
Nucleolar GTP-binding protein 1 isoform X1.
   
 
 0.956
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.