STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSPB6Heat shock protein beta-6. (169 aa)    
Predicted Functional Partners:
SFN
14-3-3 protein sigma.
   
 
 0.828
MAPKAPK2
Mitogen-activated protein kinase-activated protein kinase 2.
   
 0.767
MAPKAPK3
Mitogen-activated protein kinase-activated protein kinase 3.
   
 0.766
MAPKAPK5
Mitogen-activated protein kinase-activated protein kinase 5.
    
 0.757
GPSM2
G-protein signaling modulator 2.
      
 0.692
CRYAB
Alpha-crystallin B chain.
  
0.682
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase, testis-specific.
   
 
 0.596
CRYBA1
Beta-crystallin A3.
   
 
 0.591
YWHAQ
14-3-3 protein beta/theta/zeta.
   
 
 0.581
TBC1D21
TBC1 domain family member 21 isoform X1.
      
 0.577
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.